ENCODE FAQ: How do I find overlaps between my own ChIP-seq regions and available ENCODE transcription factors? By using the Table Browser tool you can add your ChIP-seq information as a custom track and then use the intersection feature to intersect the Txn Factor ChIP track table listed under the Regulation group with your custom track. Note, your custom track should contain ChIP-seq regions in BED format, for more information visit our custom tracks page.
Posted on: Mon, 21 Apr 2014 13:55:30 +0000
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